Mouse Circadian Rhythm Visualization 🐭

Explore the fascinating 24-hour biological cycles of mice through interactive data visualization

Link: https://lh-008.github.io/mouse_biological_rhythms/

Team Members: Longhao Lin, Matthew Wong, Yaoxi Li

Scroll to explore

What Is Circadian Rhythms? 🧐

Circadian rhythms are 24-hour biological cycles that regulate various physiological processes including sleep-wake patterns, hormone release, body temperature, and metabolism. These internal clocks are synchronized with environmental cues, primarily light and dark cycles.

This interactive visualization allows you to explore how activity levels and body temperature fluctuate in mice throughout a 24-hour period, demonstrating clear circadian patterns.

🔍Did you know? Mice are nocturnal animals, with peak activity occurring during the dark phase. Their body temperature also follows a distinct circadian pattern, with higher temperatures during their active phase and lower temperatures during rest.

Key Points About Circadian Rhythms

  • 24-hour cycle: Circadian rhythms complete a full cycle approximately every 24 hours
  • Regulated by the SCN: The suprachiasmatic nucleus in the brain acts as the master clock
  • Environmental cues: Light is the primary signal that synchronizes the internal clock
  • Affects multiple systems: Influences sleep, metabolism, hormone production, and body temperature
Circadian rhythm diagram

Diagram showing the 24-hour circadian cycle and its effects on physiological processes. Source

Individual Mouse Patterns 🐭

Each mouse demonstrates unique activity and temperature patterns throughout the day. These patterns are aligned with their nocturnal nature, showing significantly increased activity during dark periods.

Using the interactive controls below, you can explore data from different mice across different days and observe how their circadian rhythms affect their behavior and physiology.

⚡Try it yourself: Use the time slider to see how both activity levels and body temperature change throughout a 24-hour cycle. Notice how light conditions influence these patterns.

Interactive Mouse Simulation

Adjust the time slider to see changes throughout the day

Time: 00:00
Light is OFF

Current Activity Level

Body Temperature

37.0°C

Gender Differences in Circadian Rhythms 📈

Male and female mice show distinct differences in their circadian patterns. These differences reflect underlying biological variations in metabolism, hormonal regulation, and behavior between sexes.

The visualization compares average activity levels and body temperature between male and female mice. These metrics provide insight into how biological sex influences circadian rhythm expression.

💡Key insight: Male mice typically exhibit higher overall activity levels, while females maintain slightly higher average body temperatures, which may be related to different hormonal profiles.

⚡Try it yourself: Use the comparison tool below to directly compare activity patterns and body temperature between selected male and female mice on the same day.

Male Mice

Average Activity Level

22.6

Average Body Temperature

36.8°C

Female Mice

Average Activity Level

15.1

Average Body Temperature

37.3°C

Mouse Comparison Tool

Compare circadian patterns between individual male and female mice on the same day.

Select mice and a day, then click "Compare Mice" to view the comparison.

Light vs Dark: The Primary Factor ☀️🌙

Light is the most powerful environmental cue for circadian rhythms. The light-dark cycle acts as a daily reset for the internal biological clock, synchronizing physiological processes with the external world.

For nocturnal animals like mice, the response to light and dark is opposite to humans. Darkness triggers wakefulness and activity, while light signals rest time.

🤔Observe the difference: The charts reveal how activity levels and body temperature change between light and dark periods, showcasing the influence of light on circadian biology.

Environmental light cycles have a profound impact on mouse behavior and physiology. Below you can see how activity levels and body temperature differ between the light and dark periods.

Female Reproductive Cycles and Circadian Rhythms 📊

Female mice experience estrus cycles that interact with their circadian rhythms. These reproductive cycles cause periodic changes in hormone levels that significantly impact behavior and physiology.

During estrus (the fertile period), female mice often show increased activity, slightly elevated body temperature, and altered behavioral patterns. These changes demonstrate the complex interplay between reproductive and circadian systems.

🔍Interactive exploration: Use the controls to toggle between activity and temperature measurements, and filter the data to see the specific effects of estrus on circadian patterns throughout the day.

Show data for:
Hover over data points to see exact values. Compare the 24-hour patterns during estrus and non-estrus periods.

💡Key Insights

Female mice show significant physiological changes during their estrus cycle:

  • During estrus, females typically show higher overall activity levels, especially during the active dark phase
  • Body temperature tends to be slightly elevated during estrus, which is related to hormonal changes
  • The most pronounced activity differences occur during the first half of the dark phase (hours 0-6)

From Mice to Humans: Why This Matters

The study of circadian rhythms in mice extends far beyond basic research. Despite mice being nocturnal and humans diurnal, we share the same core circadian mechanisms and clock genes.

These similarities make mouse studies invaluable for understanding human conditions related to circadian disruption, including sleep disorders, jet lag, and challenges faced by shift workers.

💡Key insight: The timing of biological processes affects everything from medication effectiveness to metabolic health. Understanding these rhythms helps develop better treatments for numerous human conditions.

Opposite But Similar: Mouse vs Human Rhythms

🐭

Mouse (Nocturnal)

  • Most active during night hours
  • Body temperature peaks during dark period
  • Melatonin released during daytime
  • Sleep primarily during light hours
👤

Human (Diurnal)

  • Most active during day hours
  • Body temperature peaks during light period
  • Melatonin released during nighttime
  • Sleep primarily during dark hours

Real-World Applications

🛏️

Sleep Disorders

Research on mouse circadian rhythms has led to breakthroughs in treating insomnia and advanced/delayed sleep phase disorders in humans.

✈️

Jet Lag

Understanding how quickly mice adapt to new light schedules helps develop strategies for minimizing jet lag effects in human travelers.

🏭

Shift Work

Mouse studies reveal the health impacts of disrupted circadian rhythms, informing better schedule designs for night shift workers.

💊

Medication Timing

Circadian research has shown that the timing of medication can significantly impact its effectiveness and side effects.